Browse of TCMCG010C17617 protein

CDS

Accession Number	TCMCG010C17617
gbkey	CDS
Protein Id	XP_016571823.1
Location	complement(join(74041..74651,75160..75531,75845..76949,78144..78439,78937..79015,79129..79216,79733..79865,79937..80210,80855..82243,83355..83606,84610..84868,84961..85020,86113..86427,86586..86664,87837..87916,88037..88114,88841..88924,89008..89095,90085..90171,90249..90388,90481..90554,91661..91684))
Gene	LOC107869974
GeneID	107869974
Organism	Capsicum annuum

Protein

Length	1988aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA319678
db_source	XM_016716337.1
Definition	PREDICTED: mediator of RNA polymerase II transcription subunit 13 isoform X1 [Capsicum annuum]

EGGNOG-MAPPER Annotation

COG_category	K
Description	Component of the Mediator complex, a coactivator involved in regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko03021        [VIEW IN KEGG]
KEGG_ko	ko:K15164        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko04919        [VIEW IN KEGG] map04919        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0005215        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0006810        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008643        [VIEW IN EMBL-EBI] GO:0015144        [VIEW IN EMBL-EBI] GO:0016020        [VIEW IN EMBL-EBI] GO:0016021        [VIEW IN EMBL-EBI] GO:0022857        [VIEW IN EMBL-EBI] GO:0031224        [VIEW IN EMBL-EBI] GO:0034219        [VIEW IN EMBL-EBI] GO:0040034        [VIEW IN EMBL-EBI] GO:0044425        [VIEW IN EMBL-EBI] GO:0050789        [VIEW IN EMBL-EBI] GO:0050793        [VIEW IN EMBL-EBI] GO:0051119        [VIEW IN EMBL-EBI] GO:0051179        [VIEW IN EMBL-EBI] GO:0051234        [VIEW IN EMBL-EBI] GO:0051239        [VIEW IN EMBL-EBI] GO:0055085        [VIEW IN EMBL-EBI] GO:0065007        [VIEW IN EMBL-EBI] GO:0071702        [VIEW IN EMBL-EBI] GO:0090213        [VIEW IN EMBL-EBI] GO:2000026        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGTGGACAAATGTGTTCAAGATCGGTGGCTTACATCAAATATCTTGGTTTCAGTTTCTTCCTCATGAATCTGATGTTAACTCTCTGGTAGACAAGAGGGTGAAGCTGGATAAGAAAGACGCTGCCACATTTCTAGTGCTCTCATCTCATCTACAATTGCAGAAGGAAAGATTTCTCAGCACATGGACCAATTCCTTTGTTGGACCTTGGGACCCATCTCAGGGTCTTTACAACCCTGATGAGAAGATCAAGCTCTGGCTTTTTTTACCTGGGCAACATTCATCTGTTGTTGAAAAGGCACAGTCAGCTGTATCCAAATTAAGAGTTCTGGCGTCAGGTCTCTGGGTGGCTCCTGGAGATTCAGAAGAGCTTGCTGCTGCCCTATCTCAGGCCTTAAGGAATTGCATGGAGCGAACGCTCAGAGGACATTCATATGTTAGATATGGAGATGTATTTACAAAATACCGTCCATTTTCACAGAGTGAGGAGCTCTTCAGGAAGGGGCAGCCAGTGGTTGAGTTCATATTTGCTGCTACCGAAGAGGCTATCTTTGTCCACGTTATTATATCTGCAAAGCATATAAGAGCACTTTCAAGTGGTGACATTGATAGAATATCAGAGAATGCATCTAATGTCTCTGGTGAGGGGCTTCCAGTTATTGTCTCACCTCATGGAATGCGTGGGAGGCTTACTGGATGTTGCCCTGGTGATCTTGTGAAGCAGGTGTATCTCAGTTCTGGCAAGTTTAGTGCTTCAAATGGTATTGTTGGGCTACCATGCAATGTTTCTCAATCTGGCTATCAGCTTAAGGGACAGAATTGCTATGTTGAAGTTAGCTTTGGTTGCACTGCACCGGGAAACAACAATATACAAGAAAGTTCAAATGTACAGAATAATTCATCAAGGCCTATCAAAACAGAAGCCTCTGCAATGGCCAATGTTGTTCAAAGTAAAATACCAGATAACTGTGGAAGAATGCTTATTTACCCCCCTGAGGCTGTTCTTGTACCAGTGGTGCAAACAGCGTGTGCTAGATCATCTCTAAAAAGATTCTGGCTGCAGAACTGGATTGGGCCCTCTTTATCCTTTACATCCTCCTTTATGCATTGTTTTGATTATCATAGCGATGCCAAAGTCAATTCGATGGATGGTTCTTGGCTTGATGCAAACGTTATAGGCTCTAATCGGCGTTATAACAGTAGCAGTAACAGCAACTGCAGCAGTCTTAGCAGTACAAGTACATCTTCTAGTGATAGCGATTACAAGACTTCAGGAACTGGTGATCTTGAAGCAGATGCTGATTCTTTGATGTGTAGACAGTCTGGATTATCTTCTTTGGATCGGTCTCAAAATGACAATCTTAAGACGGGCTTTAAGAGGTCACGGACTGGGATTTCTGAGTCATTTAGTCAGGGAGGAGCAGTGGTAAATCCATCAACAAGTGATTATGCCTCAATGGAAGTTAATAATTCTGCAATAACGGGAGGAAATGATCAGCTTGGGCTTCAGTGGGGTTGGGATGACGACGATAGAGATGTAGGGATGGATATTCAGGCACTTCTCTCAGAGTTTGGAGATTTTGGTGATTTCTTTGAGAATGATGCTTTGCCATTTGGAGAGCCTCCAGGAACTGCAGAGTCTCAGACTCTTATGATTCCTGCCTCAGATAGTGTGGATGTTGGTAGCAGCCCCTGTCCTTCGATGATGGACGTGCAAGATCAGCTTCTTTTGCCAGTAGGTTTTTCATCCTTTGAGAGCTTTAATCAACCACCACCTCCAGCAATTCTGGATGATTCACTGAGCAAGCATCAGGAAGTTATTAAAAGTGCTGCAGTTGCTAATCAAGTAAACAGTACTACTGCATCTATTGCTGGTGAATTTGATCACTTAATTAAAGCTGAAGCTCTCATGTCATTCGCTCCAGAGTATGGAGCAGTTGAAACCCCCACAGGGGAGAACTCCCGTTTGATTTTCAGGAATCCCTATGTTCCAAAGTCCCGTGAAGTGGAGACTGCGAATTCAAGCTCAAATAGCTATGTTTACTCAGCGACCCCACCTTTGTCGCCTTGCTTTGATGCATGTGAGGAGAAGTCTGGGGTGACTGTAAACCTCAAAGCAGGTTCCGCAAGGCATGATACAGGCTCCATTATTCAATCAAAGAAATATTACACTCACATTGAAAGTGGGAAAGAGAAAAACGATGATAAGTTATCTGGTTATGTACGTAGTTGCGCTAGTCATGAGACTCAAGTAGCACAGTCTCCATTTTCTGGTTTCAATTCGACAAATTCTGTTAAAGGTATCCACAATAAAACCGATAAAGCCAATGAAGGGCTACTAAAAGCAGGCAGCTCTAGTCAATCAATCAAAACTGTGCTAGCAACAGAAGTTGAATGCCTTATGTGCCAGGCATTTATGTGTAAGATACGGCATACACTGTTATCTTCAAGTGGCTGCCTTCCTGTAGGCATGAGCAGGATGTCGGGGAGTACCAGTAGAAACCAGTCACAAGGCGAAGCAGTGGTCACTGGCGACAATTTGTCAATCAAATCTGAGATGAAGAAGAAAGAAATAATACCAGTTAGGATAGCGGGTGATATTGATGGTGGATTACTGGATGGGACCCTTAATGCACCAGTTGGTGTGTGGCGCTCTGTTGGAGTTTCTAAGGGAATGAAGCAACCAACAGCTGGTTTAGAATCTGGCCACTCTGTTCAGCATAATTCTTTCATTGAGGATAGTATGCTAGCTTATGGGCTAAGGCAACCACTTCAGGAACTCCTAGATGGGATGGCTTTACTTGTGCAGCAAGCCACATCTCTTGTTGATGTTGCTCTAGATGCCGATAGCAATGATGGTTCCTTTGGTTGGCTCGCACTGCAGGAGCAGTGGAGGCGTGGTTTTTCATGTAGACCATCCATGGTACATGCAGGTTGTGGGGGAGTATTGGCTTCCTGTCATTCGCTGGATATTGCTGGTGTGGAGCTTATTGATCCACTTTCAGCTGATGTTCCGGCATCATTTACCCTCACTCTGCTGCAGAATGATATAAAAGCAGCTCTGAAATCTGCTTTCGGTAATATGGAAGGTCCTTTATCTGTTGTTGATTGGTGCAAAGGTCGCAGTCAATCAAATGATGGGGGCATATCTGGTGACGGTTTTTCTGCAGAGTCCACTGCAAGTGCAAGTGAATGTCGAGATTCGTCAAGTACCATATCATTGTCTGTTGGAGAACCTATAAGTCCATCTCAGTCCTCTGCTGGTGGATCATCTAGTTTGAGAGATGGCATTAGGGTGGATGAGGCAAGTGAGCGCAGATTAAGCCAAGATACTTGCTTATCAGAGTCGGAGAATCTACTGGGTTCAAGGCTTAGGCCAACGTTGGCTGCAGTACCGTATCCGGCTATACTTCTTGGATATCAAGACGATTGGCTTAAGACATCACCTAGTTCGCTTCAGATCTGGGAAAAGGCACCTTTTGAGCCTTATGCAATGCCCAAGAATATGACATATTACGTTGTCTGCCCAGACATCAATGCTCTAACAACAGCTGCAACTGATTTTTTCCAACAGCTTGGAACTGTTTATGAAACATGCAAACTGGGAACTCATTCACCTCAATGTATGGGAAATGAGATGGAGATAGATTCCGGCAAGAATGCATCTTCTGGTTTTGTTCTGATTGATTGCCCTCAGTCAATGAAAATAGACAGCAGTAATGCATCTATGCTTGGATCAATCAGTGATTATTTTCTGGCCCTTTCCAATGGATGGGATTTAGAAAGCTATTTGAAGTCTCTCTCGAAAGTTCTCAGAAATTTAAAGCTGAGTTCATGCTTGACCATGAACCCAAAAGAAGGAAGTACTGCTCCATGTACAGTGATATACGTGGTTTGCCCTTTCCCTGAGCCCCTTGCGGTTCTACAGACGGTGATAGAATCTTCTATTGCTGTTGGATCAGTGGTTCTTTCTTCAGATAAAGAGAGGCGATCTACGCTGCACAATCAAGTCGGGAAAGCCTTAAGTTACTCAGCAGCTGTGGATGAGGCACTCTCAAATGTTCTAACACTTTCTGGGTTTTGTATCCCTAAGCTGGTATTGCAGATCGTCACTGTTGATGCAATTTTTAGGGTTACAAGCCCTGCTCTGAGTGAGCTTGTCATACTGAAGGAAATTGCTTTCACAGTTTATAACAAAGCTCGCAGAATATCTCGAGGGTCCTCCAGTGACATGGTGCAGTCGTCGTCCATGTCCGGTAGATCTCATCCGGTGATGATGCAAATGACTTCCCAAGTTCCAGGGATGTGGAAGGACTGTGTTGGTCCTCGAGGCATAGGAACTTCCCTTCAGAGAGAAACTGACCTTGATGCAAGCCTAAGGCCTGGTAGTTGGGACAACTGGCAAACATCAAGAGGGGGAGGTCTTGGATGTGAGCCAAATAGAATTCGGGATTTTTCTTTTCAAGATGAAATTCGTTACTTGTTTGAGCCCCTTTACATTCTTGCTGAACCAGGTTCATTGGATCGTGGACTTTCATTTCCGATATCGGGTAATCCAATGACTGAATCTTCAAAGCTTTTGTCGGATGATGGTACAAGTGGAAGTTTTATGCAGAGTTCAGCTTCTTCAGGTGGTGGAGACACTGGACTAAACACTCAGTCTGAAACATCTGAACCAGATGGCTTTGGATCTGCACGTCAAAGATCACTTCCAAGTTTGCATTGTTGTTATGATTGGACTGAGGATTGGCGCTGGCTGGTGTGTATATGGACTGATTCCAGGGGAGAATTGCTTGATAATCATATATATCCATTTGGAGGAATAAGTAGTAGGCAAGACACGAAAGGTCTGCAATCTTTGTTTGTGCAAATTCTGCAACAAGGATGCCAGATACTTCAGGCATGTTCTCCTGAGGCTGCCAATGCCAAGCCTAGAGATTTTGTCATTGCTCGTGTTGGAAGCTTCCTTGAGCTTGAATGCCAGGAATGGCAGAAAGCTCTGTATTCAATTGGGGGATCTGAGGTGAAGAAGTGGTCCCTGCAGCTAAGGCGATCTGTGCCTGATGGAATGACTGCAAGTAGTAATGGGACATCCTTGCCGCAACAGGAAATAGGTCTGATTCAAGAAAGAGCACTTCCTCCCTCCCCTAGTCCATTGTACAATCCTCACTCAAAGGCTTCCTCTTTTATGAAAGGTGGCTTAAGTCAACCATCCACAAGGAAACAGTTAATTGGTGGACAGGGTATAGCGGACAACTCCAGGGGCTTACTTCAATGGGTGCAAAGCATTAGTTTTGTCTCTCTTTCTGTTGATCATTCCTTACAGCTTATGGTCCAAGCGGAGTCAACAAGTCTTGGGACAAGTCAAAGTAGTGGCATTATGAGTCAGCCAGGTTATCTTGAAGGTTATACTCCAGTTAAGTCCCTTGGTTCTACGCCCACCTCCTACATTCTAATCCCGTCACCCAATATGAGATTTCTACCTCCCATCGGTCTTCAGCTTCCCACTTGCCTGACTGCTGAATCACCTCCACTCGCCCATCTTCTCCACAGCAAGGGATGTGTCATTCCCCTTTCAACAGGTTTTGTGGTTTCAAAAGCAGTACCTACAATGAGGAGAGATGCAAGGAGCATCTCAAAAGAAGAATGGCCCTCAATTCTTTCGGTCAGCCTCGTTGATTACTATGGTGGCAGCAACATCATCCAAGAAAAGTTTTTGAAGGGTGTTGTTAAGACTGGGGGAAGGGGTACAGGCTCAGAAGCAAGAGATGTGGAAACGGCGACTCACTTGATTCTTGAGAACATAGCTGCAGAGCTCCATGCTTTATCATGGATGACTGTAAGTCCGGCATACTTGGAGAGAAGATCCGCTTTGCCTTTTCATTGCGACACTGTATTAAGACTTCGAAGGCTGCTTCACTTTGCCGATAAGGAAGTTTCTCGGCAACCTGAGAAAAGCCAAGTATAG

Protein:   MWTNVFKIGGLHQISWFQFLPHESDVNSLVDKRVKLDKKDAATFLVLSSHLQLQKERFLSTWTNSFVGPWDPSQGLYNPDEKIKLWLFLPGQHSSVVEKAQSAVSKLRVLASGLWVAPGDSEELAAALSQALRNCMERTLRGHSYVRYGDVFTKYRPFSQSEELFRKGQPVVEFIFAATEEAIFVHVIISAKHIRALSSGDIDRISENASNVSGEGLPVIVSPHGMRGRLTGCCPGDLVKQVYLSSGKFSASNGIVGLPCNVSQSGYQLKGQNCYVEVSFGCTAPGNNNIQESSNVQNNSSRPIKTEASAMANVVQSKIPDNCGRMLIYPPEAVLVPVVQTACARSSLKRFWLQNWIGPSLSFTSSFMHCFDYHSDAKVNSMDGSWLDANVIGSNRRYNSSSNSNCSSLSSTSTSSSDSDYKTSGTGDLEADADSLMCRQSGLSSLDRSQNDNLKTGFKRSRTGISESFSQGGAVVNPSTSDYASMEVNNSAITGGNDQLGLQWGWDDDDRDVGMDIQALLSEFGDFGDFFENDALPFGEPPGTAESQTLMIPASDSVDVGSSPCPSMMDVQDQLLLPVGFSSFESFNQPPPPAILDDSLSKHQEVIKSAAVANQVNSTTASIAGEFDHLIKAEALMSFAPEYGAVETPTGENSRLIFRNPYVPKSREVETANSSSNSYVYSATPPLSPCFDACEEKSGVTVNLKAGSARHDTGSIIQSKKYYTHIESGKEKNDDKLSGYVRSCASHETQVAQSPFSGFNSTNSVKGIHNKTDKANEGLLKAGSSSQSIKTVLATEVECLMCQAFMCKIRHTLLSSSGCLPVGMSRMSGSTSRNQSQGEAVVTGDNLSIKSEMKKKEIIPVRIAGDIDGGLLDGTLNAPVGVWRSVGVSKGMKQPTAGLESGHSVQHNSFIEDSMLAYGLRQPLQELLDGMALLVQQATSLVDVALDADSNDGSFGWLALQEQWRRGFSCRPSMVHAGCGGVLASCHSLDIAGVELIDPLSADVPASFTLTLLQNDIKAALKSAFGNMEGPLSVVDWCKGRSQSNDGGISGDGFSAESTASASECRDSSSTISLSVGEPISPSQSSAGGSSSLRDGIRVDEASERRLSQDTCLSESENLLGSRLRPTLAAVPYPAILLGYQDDWLKTSPSSLQIWEKAPFEPYAMPKNMTYYVVCPDINALTTAATDFFQQLGTVYETCKLGTHSPQCMGNEMEIDSGKNASSGFVLIDCPQSMKIDSSNASMLGSISDYFLALSNGWDLESYLKSLSKVLRNLKLSSCLTMNPKEGSTAPCTVIYVVCPFPEPLAVLQTVIESSIAVGSVVLSSDKERRSTLHNQVGKALSYSAAVDEALSNVLTLSGFCIPKLVLQIVTVDAIFRVTSPALSELVILKEIAFTVYNKARRISRGSSSDMVQSSSMSGRSHPVMMQMTSQVPGMWKDCVGPRGIGTSLQRETDLDASLRPGSWDNWQTSRGGGLGCEPNRIRDFSFQDEIRYLFEPLYILAEPGSLDRGLSFPISGNPMTESSKLLSDDGTSGSFMQSSASSGGGDTGLNTQSETSEPDGFGSARQRSLPSLHCCYDWTEDWRWLVCIWTDSRGELLDNHIYPFGGISSRQDTKGLQSLFVQILQQGCQILQACSPEAANAKPRDFVIARVGSFLELECQEWQKALYSIGGSEVKKWSLQLRRSVPDGMTASSNGTSLPQQEIGLIQERALPPSPSPLYNPHSKASSFMKGGLSQPSTRKQLIGGQGIADNSRGLLQWVQSISFVSLSVDHSLQLMVQAESTSLGTSQSSGIMSQPGYLEGYTPVKSLGSTPTSYILIPSPNMRFLPPIGLQLPTCLTAESPPLAHLLHSKGCVIPLSTGFVVSKAVPTMRRDARSISKEEWPSILSVSLVDYYGGSNIIQEKFLKGVVKTGGRGTGSEARDVETATHLILENIAAELHALSWMTVSPAYLERRSALPFHCDTVLRLRRLLHFADKEVSRQPEKSQV